Analyze Publications Database

3,721 (and counting) Analyze-related scholarly articles

Most Recent Publications

Strategies for Training Deep Learning Models in Medical Domains with Small Reference Datasets

Gerald A. Zwettler et al. Strategies for Training Deep Learning Models in Medical Domains with Small Reference Datasets. Journal of WSCG. Publication Date July 24, 2020 How Analyze was Used “From the MRI datasets, 10 are without and 10 with Hepatocellular Liver Lesions (HCC). In case of a lesion, this class is merged with the…

Quantification of Lung Fibrosis in IPF-Like Mouse Model and Pharmacological Response to Treatment by Micro-Computed Tomography

Francesca Ruscitti et al. Quantification of Lung Fibrosis in IPF-Like Mouse Model and Pharmacological Response to Treatment by Micro-Computed Tomography. Frontiers in Pharmacology. Publication Date July 21, 2020 How Analyze was Used “For each examination, a stack of 512 cross-sectional images stored in unsigned 16-bit file format was produced. The reconstructed datasets were analyzed using…

Lentiviral delivery of human erythropoietin attenuates hippocampal atrophy and improves cognition in the R6/2 mouse model of Huntington’s disease

Simone Rolfes et al. Lentiviral delivery of human erythropoietin attenuates hippocampal atrophy and improves cognition in the R6/2 mouse model of Huntington’s disease. Neurobiology of Disease. Publication Date July 20, 2020 How Analyze was Used “Regions of interest (ROIs) were manually delineated onto T2*-weighted images according to Paxinos and Franklin mouse brain atlas (2007) for…

CCR2 of Tumor Microenvironmental Cells Is a Relevant Modulator of Glioma Biology

Matthäus Felsenstein et al. CCR2 of Tumor Microenvironmental Cells Is a Relevant Modulator of Glioma Biology. Cancers. Publication Date July 13, 2020 How Analyze was Used “Brain slices were recorded with T1- and T2-weighted 2-dimensional turbo spin-echo sequences by Paravision 4.0 software (Bruker Bio Spin®, Ettlingen, Germany). Volumes of tumors were calculated with Analyze software…

Mesenchymal stem/stromal cells and their extracellular vesicle progeny decrease injury in post-stenotic swine kidney through different mechanisms

Yu Zhao et al. Mesenchymal stem/stromal cells and their extracellular vesicle progeny decrease injury in post-stenotic swine kidney through different mechanisms. Stem Cells and Development. Publication Date July 12, 2020 How Analyze was Used “Finally, the kidney tissue was cut into small cubes, and scanned at 20μm voxels resolution using an in-house micro-CT. Images were…

Farnesoid X receptor activation inhibits TGFBR1/TAK1-mediated vascular inflammation and calcification via miR-135a-5p

Chao Li et al. Farnesoid X receptor activation inhibits TGFBR1/TAK1-mediated vascular inflammation and calcification via miR-135a-5p. Communications Biology. Publication Date June 24, 2020 How Analyze was Used “Pictures of the chest areas (including heart and thoracic aorta) of the rats were taken; the processing of the images and three-dimensional standard microstructural analysis were performed using…

Accounting for intraoperative brain shift ascribable to cavity collapse during intracranial tumor resection

Saramati Narasimhan et al. Accounting for intraoperative brain shift ascribable to cavity collapse during intracranial tumor resection. Journal of Medical Imaging. Publication Date June 22, 2020 How Analyze was Used “The preoperative MR and iMR scans were rigidly registered to one another. Using Analyze 9.0 (AnalyzeDirect, Overland Park, Kansas) and a 3D-Slicer, 28 homologous surface…

Extracellular vesicles released by adipose tissue-derived mesenchymal stromal/stem cells from obese pigs fail to repair the injured kidney

Alfonso Eirin et al. Extracellular vesicles released by adipose tissue-derived mesenchymal stromal/stem cells from obese pigs fail to repair the injured kidney. Stem Cell Research. Publication Date June 20, 2020 How Analyze was Used “Cortical and medullary regions of interest (ROIs) were traced using Analyze™. ROIs were then used to calculate single kidney regional perfusion.”…

Changes of Branched-Chain Amino Acids and Ectopic Fat in Response to Weight-loss Diets: the POUNDS Lost Trial

Xiang Li et al. Changes of Branched-Chain Amino Acids and Ectopic Fat in Response to Weight-loss Diets: the POUNDS Lost Trial. The Journal of Clinical Endocrinology & Metabolism. Publication Date June 19, 2020 How Analyze was Used “All the CT scans were analyzed at PBRC using Analyze Direct software. As a direct measure of hepatic…

Bone marrow adipose tissue is a unique adipose subtype with distinct roles in glucose homeostasis

Karla J. Suchacki et al. Bone marrow adipose tissue is a unique adipose subtype with distinct roles in glucose homeostasis. Nature Communications. Publication Date June 18, 2020 How Analyze was Used “HU of subcutaneous fat, yellow marrow and RM were determined using Analyze 12.0 software (AnalyzeDirect, Overland Park, KS, USA) based on data from 33…