AnalyzeDirect Hogan RE, Bouilleret V, Liu YR, Wang L, Williams JP, Jupp B, Myers D, O’Brien TJ. MRI-based large deformation high dimensional mapping of the hippocampus in rats: development and validation of the technique. J Magn Reson Imaging. May 2009;29(5):1027-1034.
Publication Date
May 2009
How Analyze was Used
“Analyze AVW version 7.0 … was used as the software package for initial image processing. MR images were cropped and converted to an isotropic voxel dimension of 0.1171875. The intensities of the MRI dataset used for the “atlas” image were adjusted, using visual inspection, for optimal contrast of gray and white matter structures, and converted from 16-bit to 8-bit intensity ranges.”
Keywords
Aging/pathology
Algorithms
Animals
Hippocampus/anatomy & histology
Image Enhancement/methods
Image Interpretation, Computer-Assisted/methods
Imaging, Three-Dimensional/methods
Magnetic Resonance Imaging (MRI)/methods
Male
Rats
Rats, Wistar
Reproducibility of Results
Sensitivity and Specificity
Author Affiliation(s)
The Department of Neurology, Washington University, St. Louis, Missouri, US. (REH)
Departments of Medicine, The Royal Melbourne Hospital, The University of Melbourne, Parkville, Victoria, Australia. (VB, YRL, BJ, DM, TJP)
Department of Neurophysiology and Epilepsy, ApHp, CHU Bicetre, Paris, France. (VB)
Department of Psychiatry, Northwestern University, Chicago, Illinois, US. (LW)
The Howard Florey Institute, Parkville, Victoria, Australia. (JPW)
Department of Surgery, The Royal Melbourne Hospital, The University of Melbourne, Parkville, Victoria, Australia. (TJO)
The Royal Melbourne Hospital, The University of Melbourne, Parkville, Victoria, Australia. (TJO)
ID# 1400
Tags: Aging/pathology, Algorithms, Animals, Computer-Assisted Image Interpretation/methods, Hippocampus/anatomy & histology, Image Enhancement/methods, Magnetic Resonance Imaging (MRI)/methods, Male, Rats, Reproducibility of Results, Sensitivity and Specificity, Three-Dimensional Imaging/methods, Wistar Rats