Tag Archives: Micro-CT

Additively manufactured test phantoms for mimicking soft tissue radiation attenuation in CBCT using Polyjet technology

Sepideh Hatamikia et al. Additively manufactured test phantoms for mimicking soft tissue radiation attenuation in CBCT using Polyjet technology Zeitschrift für Medizinische Physik. Publication Date July 2, 2022 How Analyze was Used “To calculate radiodensity of the example test case phantom, HU analysis was done using Analyze 12.0 toolkit (AnalyzeDirect, Overland Park, United States) by…

miR-129-5p Promotes Osteogenic Differentiation of BMSCs and Bone Regeneration via Repressing Dkk3

Changming Zhao et al. miR-129-5p Promotes Osteogenic Differentiation of BMSCs and Bone Regeneration via Repressing Dkk3 Stem Cells International. Publication Date July 16, 2021 How Analyze was Used “Subsequently, the 3D structure of new bone formation at surgical sites was precisely evaluated using auxiliary histomorphometric software (AnalyzeDirect, Kansas, USA). Furthermore, measurements of the ratio of…

Metabolic activities affect femur and lumbar vertebrae remodeling, and anti-resorptive risedronate disturbs femoral cortical bone remodeling

Mi Yeong Kim et al. Metabolic activities affect femur and lumbar vertebrae remodeling, and anti-resorptive risedronate disturbs femoral cortical bone remodeling Experimental & Molecular Medicine. Publication Date January 12, 2021 How Analyze was Used “Trabecular and cortical bone microarchitectures (femoral and lumbar) were assessed by performing high‐resolution microcomputed tomography (µCT) analysis. The µCT images were…

Quantification of Lung Fibrosis in IPF-Like Mouse Model and Pharmacological Response to Treatment by Micro-Computed Tomography

Francesca Ruscitti et al. Quantification of Lung Fibrosis in IPF-Like Mouse Model and Pharmacological Response to Treatment by Micro-Computed Tomography. Frontiers in Pharmacology. Publication Date July 21, 2020 How Analyze was Used “For each examination, a stack of 512 cross-sectional images stored in unsigned 16-bit file format was produced. The reconstructed datasets were analyzed using…

NIR-II driven plasmon-enhanced cascade reaction for tumor microenvironment-regulated catalytic therapy based on bio-breakable Au–Ag nanozyme

Min Xu et al. NIR-II driven plasmon-enhanced cascade reaction for tumor microenvironment-regulated catalytic therapy based on bio-breakable Au–Ag nanozyme. Nano Research. Publication Date June 2, 2020 How Analyze was Used “Then the CT images were captured prior to and after injection by micro CT scanner (Quantum FX, PerkinElmer, Hopkinton, MA, USA). Analyze 12.0 (AnalyzeDirect, Overland…

Automatization and improvement of μCT analysis for murine lung disease models using a deep learning approach

Gerald Birk et al. Automatization and improvement of μCT analysis for murine lung disease models using a deep learning approach. Respiratory Research. Publication Date May 24, 2020 How Analyze was Used “Threshold-based, semi-automated segmentation and generation of lung densitometric data were done using Analyze 12 (AnalyzeDirect, Inc.).” Keywords Lung disease models, Deep learning, Micro-CT, Computational…

Transient receptor potential vanilloid 1 and 4 double knockout leads to increased bone mass in mice

Haruki Nishimura et al. Transient receptor potential vanilloid 1 and 4 double knockout leads to increased bone mass in mice. Bone Reports. Publication Date April 23, 2020 How Analyze was Used “A micro-CT system (CosmoScan GX; Rigaku, Tokyo, Japan) was used, and the minimum threshold for bone was 304 mg/cm 3. The bone microstructure parameters…

In vivo fluorescence molecular tomography of induced haemarthrosis in haemophilic mice: link between bleeding characteristics and development of bone pathology

K. K. Vøls et al. In vivo fluorescence molecular tomography of induced haemarthrosis in haemophilic mice: link between bleeding characteristics and development of bone pathology. BMC Musculoskeletal Disorders. Publication Date April 14, 2020 How Analyze was Used “900 μm of the trabecular bone of the tibia, distal to the growth zone was analysed to calculate the…

Assessment of Arterial Function Using MicroCT Imaging

Alexandre Belenkov, Olivia J. Kelada, Baktybek Kojonazarov. Assessment of Arterial Function Using MicroCT Imaging. Preclinical In Vivo Imaging Application Note. Publication Date April 1, 2020 How Analyze was Used “End-systolic and end-diastolic images were analyzed using Analyze 12.0 (AnalyzeDirect, Inc., Overland Park, KS). Oblique Sections were used to align the heart in the long and…

In Vivo Quantitative Microcomputed Tomographic Analysis of Vasculature and Organs in a Normal and Diseased Mouse Model

Nanditha Mohan Das1, Sarah Hatsell1, Kalyan Nannuru1, Lily Huang1, Xialing Wen1, Lili Wang1, Li-Hsien Wang1, Vincent Idone1, Jeffrey A. Meganck2, Andrew Murphy1, Aris Economides1, and LiQin Xie1. In Vivo Quantitative Microcomputed Tomographic Analysis of Vasculature and Organs in a Normal and Diseased Mouse Model. PLoS One. February 24th, 2016. Full Text – Open Access  …