Tag Archives: Mice

Disordered metabolism in mice lacking irisin

Yunyao Luo et al. Disordered metabolism in mice lacking irisin Scientific Reports. Publication Date October 15, 2020 How Analyze was Used “The trabecular bone region was identified by semi-manually contouring the trabecular bone in the ROI with the assistance of an auto-thresholding software algorithm (Analyze 12.0, PerkinElmer). Morphometric variables were computed from the binarized images…

IFT20 is critical for collagen biosynthesis in craniofacial bone formation

Hiroyuki Yamaguchi et al. IFT20 is critical for collagen biosynthesis in craniofacial bone formation Biochemical and Biophysical Research Communications. Publication Date September 28, 2020 How Analyze was Used “One hundred slices of metaphyses under the growth plate, constituting 1.0 mm in length, were selected and reconstructed to produce 2D and 3D images (Analyze12.0: AnalyzeDirect Inc.,…

Quantification of Lung Fibrosis in IPF-Like Mouse Model and Pharmacological Response to Treatment by Micro-Computed Tomography

Francesca Ruscitti et al. Quantification of Lung Fibrosis in IPF-Like Mouse Model and Pharmacological Response to Treatment by Micro-Computed Tomography. Frontiers in Pharmacology. Publication Date July 21, 2020 How Analyze was Used “For each examination, a stack of 512 cross-sectional images stored in unsigned 16-bit file format was produced. The reconstructed datasets were analyzed using…

Deficiency of sterol regulatory element‐binding protein‐1c induces schizophrenia‐like behavior in mice

Sueun Lee et al. Deficiency of sterol regulatory element‐binding protein‐1c induces schizophrenia‐like behavior in mice. Genes, Brain and Behavior. Publication Date November 14 2018 How Analyze was Used “Following scanning, the images were segmented using Analyze software 12.0 (AnalyzeDirect, Overland Park, KS, USA).” Keywords Behavior, GABAergic transmission, Mice, Schizophrenia, SREBP‐1c Author Affiliation(s) Chonnam National University,…

NDRG1 overexpressing glioma are characterized by reduced tumor vascularisation and resistance to antiangiogenic treatment

Broggini T, Wüstner M, Harms C, Stange L, Blaes J, Thomé C, Harms U, Mueller S, Weiler M, Wick W. NDRG1 overexpressing glioma are characterized by reduced tumor vascularisation and resistance to antiangiogenic treatment. Cancer Lett. August 2015. Publication Date August 2015 How Analyze was Used “For T1w contrast 100 µl Gd-DTPA (Magnevist …) 0.5…

In vivo MRI evidence that neuropathology is attenuated by cognitive enrichment in the YAC128 Huntington’s Disease mouse model

Steventon JJ, Harrison DJ, Trueman RC, Rosser AE, Jones DK, Brooks SP. In vivo MRI evidence that neuropathology is attenuated by cognitive enrichment in the YAC128 Huntington’s Disease mouse model. J Huntingtons Dis. July 2015;4(2):149-160. Publication Date July 2015 How Analyze was Used “Processing of the T 2 -weighted images was carried out using Analyze…

Assessing the accuracy and reproducibility of modality independent elastography in a murine model of breast cancer

Weis JA, Flint KM, Sanchez V, Yankeelov TE, Miga MI. Assessing the accuracy and reproducibility of modality independent elastography in a murine model of breast cancer. J Med Imaging. July 2015;2(3):036001-036001. Full Text – Open Access Publication Date July 2015 How Analyze was Used “MR image volumes were semiautomatically processed to segment the object of…

Impact of short-term 1,25-dihydroxyvitamin D3 on the chemopreventive efficacy of erlotinib against oral cancer

Bothwell KD, Shaurova T, Merzianu M, Suresh A, Kuriakose MA, Johnson CS, Hershberger PA, Seshadri M. Impact of short-term 1,25-dihydroxyvitamin D3 on the chemopreventive efficacy of erlotinib against oral cancer. Cancer Prev Res (Phila). June 22015. Publication Date June 2015 How Analyze was Used “Following MR image acquisition, raw image sets were transferred to a…

Fully-automated, high-throughput micro-computed tomography analysis of body composition enables therapeutic efficacy monitoring in preclinical models

Wyatt SK, Barck KH, Kates L, Zavala-Solorio J, Ross J, Kolumam G, Sonoda J, Carano RA. Fully-automated, high-throughput micro-computed tomography analysis of body composition enables therapeutic efficacy monitoring in preclinical models. Int J Obes (Lond). June 2015. Publication Date June 2015 How Analyze was Used “An automatic image analysis algorithm was developed using the C++…

Blocking stroke-induced immunodeficiency increases CNS antigen-specific autoreactivity but does not worsen functional outcome after experimental stroke

Römer C, Engel O, Winek K, Hochmeister S, Zhang T, Royl G, Klehmet J, Dirnagl U, Meisel C, Meisel A. Blocking stroke-induced immunodeficiency increases CNS antigen-specific autoreactivity but does not worsen functional outcome after experimental stroke. J Neurosci. May 2015;35(20):7777-7794. Publication Date May 2015 How Analyze was Used “Axial slices covered the distance between the…