Tag Archives: Mice

Effects of elastase-induced emphysema on muscle and bone in mice

Daichi Matsumura et al. Effects of elastase-induced emphysema on muscle and bone in mice PLOS One. Publication Date June 23, 2023 How Analyze was Used “The microstructural parameters of the femur were assessed using the visualization and analysis software, Analyze 14.0 (AnalyzeDirect, Inc., KS, USA). A 1-mm-thick region from 100 μm proximal to the end…

Deficiency of G protein-coupled receptor Gpr111/Adgrf2 causes enamel hypomineralization in mice by alteration of the expression of kallikrein-related peptidase 4 (Klk4) during pH cycling process

Yuta Chiba et al. Deficiency of G protein-coupled receptor Gpr111/Adgrf2 causes enamel hypomineralization in mice by alteration of the expression of kallikrein-related peptidase 4 (Klk4) during pH cycling process Federation of American Societies for Experimental Biology. Publication Date March 17, 2023 How Analyze was Used “Three- dimensional reconstruction and quantification of enamel and dentin volume…

Prolonged Antibiotic Exposure during Adolescence Dysregulates Liver Metabolism and Promotes Adiposity in Mice

Matthew D. Carson et al. Prolonged Antibiotic Exposure during Adolescence Dysregulates Liver Metabolism and Promotes Adiposity in Mice The American Journal of Pathology. Publication Date March 12, 2023 How Analyze was Used “The scanned, calibrated three-dimensional images were then reconstructed and analyzed using Analyze 12.0 software (AnalyzeDirect). The volume of interest was assessed via axial…

Gpr75-deficient mice are protected from high-fat diet–induced obesity

Sakib Hossain et al. Gpr75-deficient mice are protected from high-fat diet–induced obesity Obesity. Publication Date February 28, 2023 How Analyze was Used “Settings were optimized for body composition, and CT scans were acquired for 6 minutes and analyzed using Analyze 14.0 software (AnalyzeDirect). Fat was isolated for analysis by density threshold.” Keywords Gpr75, Gpr75-deficient, Mice,…

Micro-CT acquisition and image processing to track and characterize pulmonary nodules in mice

May Zaw Thin et al. Micro-CT acquisition and image processing to track and characterize pulmonary nodules in mice Nature Protocols . Publication Date December 9, 2022 How Analyze was Used “Generally, there are two types of tumor volume analysis that can be performed: the direct measurement of individual tumor volume or the indirect quantification of…

Premature aging in mice with error-prone protein synthesis

Dimitri Shcherbakov et al. Premature aging in mice with error-prone protein synthesis Science Advances. Publication Date March 2, 2022 How Analyze was Used “We performed trimonthly quantitative assessments of body composition in conscious male mice with a body composition analyzer (EchoMRI-500, EchoMRI LLC, Houston, TX, USA) starting at the age of 3 months. In addition,…

Disordered metabolism in mice lacking irisin

Yunyao Luo et al. Disordered metabolism in mice lacking irisin Scientific Reports. Publication Date October 15, 2020 How Analyze was Used “The trabecular bone region was identified by semi-manually contouring the trabecular bone in the ROI with the assistance of an auto-thresholding software algorithm (Analyze 12.0, PerkinElmer). Morphometric variables were computed from the binarized images…

IFT20 is critical for collagen biosynthesis in craniofacial bone formation

Hiroyuki Yamaguchi et al. IFT20 is critical for collagen biosynthesis in craniofacial bone formation Biochemical and Biophysical Research Communications. Publication Date September 28, 2020 How Analyze was Used “One hundred slices of metaphyses under the growth plate, constituting 1.0 mm in length, were selected and reconstructed to produce 2D and 3D images (Analyze12.0: AnalyzeDirect Inc.,…

Quantification of Lung Fibrosis in IPF-Like Mouse Model and Pharmacological Response to Treatment by Micro-Computed Tomography

Francesca Ruscitti et al. Quantification of Lung Fibrosis in IPF-Like Mouse Model and Pharmacological Response to Treatment by Micro-Computed Tomography. Frontiers in Pharmacology. Publication Date July 21, 2020 How Analyze was Used “For each examination, a stack of 512 cross-sectional images stored in unsigned 16-bit file format was produced. The reconstructed datasets were analyzed using…

Deficiency of sterol regulatory element‐binding protein‐1c induces schizophrenia‐like behavior in mice

Sueun Lee et al. Deficiency of sterol regulatory element‐binding protein‐1c induces schizophrenia‐like behavior in mice. Genes, Brain and Behavior. Publication Date November 14 2018 How Analyze was Used “Following scanning, the images were segmented using Analyze software 12.0 (AnalyzeDirect, Overland Park, KS, USA).” Keywords Behavior, GABAergic transmission, Mice, Schizophrenia, SREBP‐1c Author Affiliation(s) Chonnam National University,…