Tag Archives: Brain/pathology

Colorization and automated segmentation of human T2 MR brain images for characterization of soft tissues

Attique M, Gilanie G, Hafeez U, Mehmood MS, Naweed MS, Ikram M, Kamran JA, Vitkin A. Colorization and automated segmentation of human T2 MR brain images for characterization of soft tissues. PLoS One. March 2012;7(3):e33616. Full Text – Open Access Publication Date March 2012 How Analyze was Used “The results from Gaussian clustering are obtained…

CMV infection attenuates the disease course in a murine model of multiple sclerosis

Pirko I, Cardin R, Chen Y, Lohrey AK, Lindquist DM, Dunn RS, Zivadinov R, Johnson AJ. CMV infection attenuates the disease course in a murine model of multiple sclerosis. PLoS One. February 2012;7(2):e32767. Full Text – Open Access Publication Date February 2012 How Analyze was Used “Volumetric analysis using the 3D ROI tool was conducted…

Automatic segmentation of brain white matter and white matter lesions in normal aging: comparison of five multispectral techniques

Valdés Hernández MC, Gallacher PJ, Bastin ME, Royle NA, Maniega SM, Deary IJ, Wardlaw JM. Automatic segmentation of brain white matter and white matter lesions in normal aging: comparison of five multispectral techniques. Magn Reson Imaging. February 2012;30(2):222-229. Publication Date February 2012 How Analyze was Used “We evaluated the four supervised multispectral classifiers available in…

Characterization of insulin degrading enzyme and other amyloid-beta degrading proteases in human serum: a role in Alzheimer’s disease?

Liu Z, Zhu H, Fang GG, Walsh K, Mwamburi M, Wolozin B, Abdul-Hay SO, Ikezu T, Leissring MA, Qiu WQ. Characterization of insulin degrading enzyme and other amyloid-beta degrading proteases in human serum: a role in Alzheimer’s disease? J Alzheimers Dis. January 2012;29(2):329-340. Full Text – Open Access Publication Date January 2012 How Analyze was…

White matter involvement in idiopathic normal pressure hydrocephalus: a voxel-based diffusion tensor imaging study

Kanno S, Abe N, Saito M, Takagi M, Nishio Y, Hayashi A, Uchiyama M, Hanaki R, Kikuchi H, Hiraoka K, Yamasaki H, Iizuka O, Takeda A, Itoyama Y, Takahashi S, Mori E. White matter involvement in idiopathic normal pressure hydrocephalus: a voxel-based diffusion tensor imaging study. J Neurol. November 2011;258(11):1949-1957. Publication Date November 2011 How…

Decreased fragile X mental retardation protein expression underlies amygdala dysfunction in carriers of the fragile X premutation

Hessl D, Wang JM, Schneider A, Koldewyn K, Le L, Iwahashi C, Cheung K, Tassone F, Hagerman PJ, Rivera SM. Decreased fragile X mental retardation protein expression underlies amygdala dysfunction in carriers of the fragile X premutation. Biol Psychiatry. November 2011;70(9):859-865. Full Text – Open Access Publication Date November 2011 How Analyze was Used “Amygdala…

Acute perfusion and diffusion abnormalities predict early new MRI lesions 1 week after minor stroke and transient ischemic attack

Asdaghi N, Hameed B, Saini M, Jeerakathil T, Emery D, Butcher K. Acute perfusion and diffusion abnormalities predict early new MRI lesions 1 week after minor stroke and transient ischemic attack. Stroke. August 2011;42(8):2191-2195. Full Text – Open Access Publication Date August 2011 How Analyze was Used “Planimetric DWI lesion and perfusion-weighted imaging deficit volume…

Regionally distinct white matter lesions do not contribute to regional gray matter atrophy in patients with multiple sclerosis

Antulov R, Carone DA, Bruce J, Yella V, Dwyer MG, Tjoa CW, Benedict RH, Zivadinov R. Regionally distinct white matter lesions do not contribute to regional gray matter atrophy in patients with multiple sclerosis. J Neuroimaging. July 2011;21(3):210-218. Publication Date July 2011 How Analyze was Used “The images were AC-PC aligned (Analyze software, version 5.0).”…

MRI detection of tissue pathology beyond atrophy in Alzheimer’s disease: introducing T2-VBM

Diaz-de-Grenu LZ, Acosta-Cabronero J, Pereira JMS, Pengas G, Williams GB, Nestor PJ. MRI detection of tissue pathology beyond atrophy in Alzheimer’s disease: introducing T2-VBM. Neuroimage. June 2011;56(4):1946-1953. Publication Date June 2011 How Analyze was Used “The lesion ROIs were defined from the resulting group- level abnormalities described above (two-sample T-tests at FDR, q b 0.005)….

On the use of a spin-echo based double inversion recovery acquisition for the measurement of cortical brain thickness

Nam Y, Kim EY, Kim DH. On the use of a spin-echo based double inversion recovery acquisition for the measurement of cortical brain thickness. J Magn Reson Imaging. May 2011;33(5):1218-1223. Publication Date May 2011 How Analyze was Used “[The] segmentation step was done using the Analyze 9.0 software (AnalyzeDirect, inc). Then, the signal intensities of…