Johnson HL, Chen Y, Jin F, Hanson LM, Gamez JD, Pirko I, Johnson AJ. CD8 T cell-initiated blood-brain barrier disruption is independent of neutrophil support. J Immunol. August 2012;189(4):1937-1945. Full Text – Open Access Publication Date August 2012 How Analyze was Used “The 3D volume of vascular permeability was quantified using Analyze 10 software.” Keywords…
Pirko I, Chen Y, Lohrey AK, McDole J, Gamez JD, Allen KS, Pavelko KD, Lindquist DM, Dunn RS, Macura SI, Johnson AJ. Contrasting roles for CD4 vs. CD8 T-cells in a murine model of virally induced “T1 black hole” formation. PLoS One. February 2012;7(2):e31459. Full Text – Open Access Publication Date February 2012 How Analyze…
Pirko I, McDole J, Chen Y, Dunn S, Lindquist D, Johnson A. Contrasting roles for CD4 and CD8 T cells in a murine model of T1 black hole formation. Paper presented at: Joint Annual Meeting International Society for Magnetic Resonance in Medicine-European Society for Magnetic Resonance in Medicine and Biology; May 2010; Stockholm. Full Text…
Pirko I, Johnson AJ, Lohrey AK, Chen Y, Ying J. Deep gray matter T2 hypointensity correlates with disability in a murine model of MS. J Neurol Sci. July 2009;282(1-2):34-38. Full Text – Open Access Publication Date July 2009 How Analyze was Used “All 3D images were co-registered to a base image using a 6 degree…
Pirko I, Johnson A, Lohrey AK, Ying J, Lindquist D, Dunn R. MRI detectable spinal cord atrophy correlates with disability in a murine model of multiple sclerosis. Paper presented at: ISMRM 17th Scientific Meeting and Exhibition, April 2009; Honolulu, HI, US. Publication Date April 2009 How Analyze was Used “3D images were co-registered to a…
Pirko I, Nolan TK, Holland SK, Johnson AJ. Multiple sclerosis: pathogenesis and MR imaging features of T1 hypointensities in murine model. Radiology. March 2008;246(3):790-795. Full Text – Open Access Publication Date March 2008 How Analyze was Used “MR imaging data sets were analyzed by using a commercially available biomedical image-processing software package (Analyze, version 6.2…
Pirko I, Gamez J, Johnson AJ, Macura SI, Rodriguez M. Dynamics of MRI lesion development in an animal model of viral-induced acute progressive CNS demyelination. Neuroimage. February 2004;21(2):576-582. Publication Date February 2004 How Analyze was Used “Analysis of 3D image sets: brain extraction, coregistration, segmentation, and volumetry. Analyze 4.0 and 5.0 …, was used for…
Pirko I, Johnson A, Rodriguez M, Macura S. Immuno-imaging: cell-selective in vivo nmr microscopy in experimental animals. Paper presented at: ISMRM 11th Scientific Meeting and Exhibition, July 2003; Toronto, Canada. Publication Date July 2003 How Analyze was Used “Image analysis and reconstruction and geometric matching of areas of interest between MRI and immunohistochemistry was done…
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