Tag Archives: Phenotype

Dental and craniofacial defects in the Crtap−/− mouse model of osteogenesis imperfecta type VII

He Xu et al. Dental and craniofacial defects in the Crtap−/− mouse model of osteogenesis imperfecta type VII. Developmental Dynamics. Publication Date March 5, 2020 How Analyze was Used “Mandibles were scanned in a µCT 50 (Scanco Medical, Bassersdorf, Switzerland) at 70 kVp, 76 µA, 0.5 Al filter, 900 ms integration time, and 6 µm…

Clinical correlates of raphe serotonergic dysfunction in early Parkinson’s disease

Qamhawi Z, Towey D, Shah B, Pagano G, Seibyl J, Marek K, Borghammer P, Brooks DJ, Pavese N. Clinical correlates of raphe serotonergic dysfunction in early Parkinson’s disease. Brain. July 2015. Publication Date July 2015 How Analyze was Used “Available images were loaded together with a single subject MRI template in Montreal Neurological Institute space…

Diverse phenotypes and specific transcription patterns in twenty mouse lines with ablated LincRNAs

Lai KMV, Gong G, Atanasio A, Rojas J, Quispe J, Posca J, White D, Huang M, Fedorova D, Grant C, Miloscio L, Droguett G, Poueymirou WT, Auerbach W, Yancopoulos GD, Frendewey D, Rinn J, Valenzuela DM. Diverse phenotypes and specific transcription patterns in twenty mouse lines with ablated LincRNAs. PLoS One. April 2015;10(4):e0125522. Full Text…

Mind the gap: genetic manipulation of basicranial growth within synchondroses modulates calvarial and facial shape in mice through epigenetic interactions

Parsons TE, Downey CM, Jirik FR, Hallgrimsson B, Jamniczky HA. Mind the gap: genetic manipulation of basicranial growth within synchondroses modulates calvarial and facial shape in mice through epigenetic interactions. PLoS One. Februrary 2015;10(2):e0118355. Full Text – Open Access Publication Date February 2015 How Analyze was Used “Adult volume renderings were landmarked with Analyze 5.0.”…

Mutations in the Latent TGF-beta Binding Protein 3 (LTBP3) gene cause brachyolmia with amelogenesis imperfecta

Huckert M, Stoetzel C, Morkmued S, Laugel-Haushalter V, Geoffroy V, Muller J, Clauss F, Prasad MK, Obry F, Raymond JL, Switala M, Alembik Y, Soskin S, Mathieu E, Hemmerlé J, Weickert JL, Dabovic B, Rifkin DB, Dheedene A, Boudin E, Caluseriu O, Cholette MC, McLeod R, Antequera R, Gellé MP, Coeuriot JL, Jacquelin LF, Bailleul-Forestier…

Early changes in morphology relevant to craniofacial research in C57BL/6J mice

Camci ED, Cox TC. Early changes in morphology relevant to craniofacial research in C57BL/6J mice. Paper presented at: Bruker MicroCT America’s User Meeting 2013; October 2013, Chelmsford, MA, US. Publication Date October 2013 How Analyze was Used “Segmentation was carried out with Analyze 10.0.” Keywords Animals Biomedical Research Cervical Vertebrae Cleft Lip Craniosynostoses Documentation Gene…

In vivo imaging of lipid storage and regression in diet-induced obesity during nutrition manipulation

Bidar AW, Ploj K, Lelliott C, Nelander K, Winzell MS, Böttcher G, Oscarsson J, Storlien L, Hockings PD. In vivo imaging of lipid storage and regression in diet-induced obesity during nutrition manipulation. Am J Physiol Endocrinol Metab. December 2012;303(11):E1287-1295. Full Text – Open Access Publication Date December 2012 How Analyze was Used “Adipose tissue compartments…

Effects of environmental perturbations during postnatal development on the phenotypic integration of the skull

Gonzalez PN, Oyhenart EE, Hallgrimsson B. Effects of environmental perturbations during postnatal development on the phenotypic integration of the skull. J Exp Zool B Mol Dev Evol. December 2011;316(8):547-561. Full Text – Open Access Publication Date December 2011 How Analyze was Used “Sixty two three-dimensional (3D) landmarks from both sides of the skull (Fig. 1,…

Epigenetic integration of the developing brain and face

Parsons TE, Schmidt EJ, Boughner JC, Jamniczky HA, Marcucio RS, Hallgrimsson B. Epigenetic integration of the developing brain and face. Dev Dyn. October 2011;240(10):2233-2244. Full Text – Open Access Publication Date October 2011 How Analyze was Used “The reconstructed image stacks were then imported into ANALYZE 5.0 software … for landmarking.” Keywords Animals Biological Evolution…

Genetic loci for bone architecture determined by three-dimensional CT in crosses with the diabetic GK rat

Lagerholm S, Park HB, Luthman H, Nilsson M, McGuigan F, Swanberg M, Akesson K. Genetic loci for bone architecture determined by three-dimensional CT in crosses with the diabetic GK rat. Bone. December 2010;47(6):1039-1047. Publication Date December 2010 How Analyze was Used “The images were processed using the Analyze (version 5.0) software package.” Keywords Animals Crosses,…