Gousias IS, Edwards AD, Rutherford MA, Counsell SJ, Hajnal JV, Rueckert D, Hammers A. Magnetic resonance imaging of the newborn brain: manual segmentation of labelled atlases in term-born and preterm infants. Neuroimage. September 2012;62(3):1499-1509. Publication Date September 2012 How Analyze was Used “T1 images were resliced to create isotropic voxels of 0.82 × 0.82 ×…
Butson CR, Cooper SE, Henderson JM, Wolgamuth B, McIntyre CC. Probabilistic analysis of activation volumes generated during deep brain stimulation. Neuroimage. February 2011;54(3):2096-2104. Full Text – Open Access Publication Date February 2011 How Analyze was Used “Analyze 7.0 (AnalyzeDirect, Lenexa, KS, USA) was used to coregister the pre- and post-operative MRI volumes using the ITK…
Roberts T, McGreevy P, Valenzuela M. Human induced rotation and reorganization of the brain of domestic dogs. PLoS One. July 2010;5(7):e11946. Full Text – Open Access Publication Date July 2010 How Analyze was Used “Using Analyze …, each dog’s brain was realigned to the hard palate, as per veterinary radiological convention [McGreevy et al. 2003].”…
Schepkin VD, Brey WW, Gor’kov PL, Grant SC. Initial in vivo rodent sodium and proton MR imaging at 21.1 T. Magn Reson Imaging. April 2010;28(3):400-407. Full Text – Open Access Publication Date April 2010 How Analyze was Used “Image processing was performed using … Analyze 8.1 software.” Keywords Animals Brain/anatomy & histology Brain Chemistry High…
Hopkins WD, Lyn H, Cantalupo C. Volumetric and lateralized differences in selected brain regions of chimpanzees (Pan troglodytes) and bonobos (Pan paniscus). Am J Primatol. December 2009;71(12):988-997. Full Text – Open Access Publication Date December 2009 How Analyze was Used “The archived MRI data were transferred to a PC running Analyze 7.0 … software for…
McLaren DG, Kosmatka KJ, Oakes TR, Kroenke CD, Kohama SG, Matochik JA, Ingram DK, Johnson SC. A population-average MRI-based atlas collection of the rhesus macaque. Neuroimage. March 2009;45(1):52-59. Full Text – Open Access Publication Date March 2009 How Analyze was Used “3D object maps were manually drawn by trained individuals to delineate brain from non-brain…
Colibazzi T, Zhu H, Bansal R, Schultz RT, Wang Z, Peterson BS. Latent volumetric structure of the human brain: exploratory factor analysis and structural equation modeling of gray matter volumes in healthy children and adults. Hum Brain Mapp. November 2008;29(11):1302-1312. Full Text – Open Access Publication Date November 2008 How Analyze was Used “Morphometric analyses…
Gousias IS, Rueckert D, Heckemann RA, Dyet LE, Boardman JP, Edwards AD, Hammers A. Automatic segmentation of brain MRIs of 2-year-olds into 83 regions of interest. Neuroimage. April 2008;40(2):672-684. Publication Date April 2008 How Analyze was Used “The 83 ROIs per MRI data set were created on Sun Blade 100 workstations … using Analyze AVW…
Ahsan RL, Allom R, Gousias IS, Habib H, Turkheimer FE, Free S, Lemieux L, Myers R, Duncan JS, Brooks DJ, Koepp MJ, Hammers A. Volumes, spatial extents and a probabilistic atlas of the human basal ganglia and thalamus. Neuroimage. November 2007;38(2):261-270. Publication Date November 2007 How Analyze was Used “Anatomical subdivision of the data sets….
Miocinovic S, Noecker AM, Maks CB, Butson CR, McIntyre CC. Cicerone: stereotactic neurophysiological recording and deep brain stimulation electrode placement software system. Acta Neurochir Suppl. August 2007;97(Pt 2):561-567. Publication Date August 2007 How Analyze was Used “The MRI and CT are co-registered in Analyze 6.0 (AnalyzeDirect, Lenexa, KS) and imported into Cicerone as VTK volume…
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