AnalyzeDirect

Deans AE, Wadghiri YZ, Aristizábal O, Turnbull DH. 3D mapping of neuronal migration in the embryonic mouse brain with magnetic resonance microimaging. Neuroimage. April 2015.

Publication Date
April 2015

How Analyze was Used
“Image analysis and segmentation was done using Analyze (AnalyzeDirect) and Amira … software packages. Each brain was segmented from the 3D micro-MRI dataset using a semi-automated method of seeding with manual editing to remove non-neural tissues when necessary.”

Keywords
Brain
Embryo, Mammalian
Ferrosoferric Oxide
Magnetic Resonance Imaging (MRI)
Median Eminence
Mice
Microscopy, Acoustic
Neurons

Author Affiliation(s)
Skirball Institute of Biomolecular Medicine, Departments of New York University School of Medicine, 540 First Ave, New York, NY 10016, US. (AED, OA, DHT)

Radiology, New York University School of Medicine, 540 First Ave, New York, NY 10016, US. (YZW, DHT)

Pathology, New York University School of Medicine, 540 First Ave, New York, NY 10016, US. (DHT)

ID# 2228

Tags: Acoustic Microscopy, Brain, Ferrosoferric Oxide, Magnetic Resonance Imaging (MRI), Mammalian Embryo, Median Eminence, Mice, Neurons