Tag Archives: Image Enhancement/methods

Morphological studies of the murine heart based on probabilistic and statistical atlases

Perperidis D, Bucholz E, Johnson GA, Constantinides C. Morphological studies of the murine heart based on probabilistic and statistical atlases. Comput Med Imaging Graph. March 2012;36(2):119-129. Full Text – Open Access Publication Date March 2012 How Analyze was Used “Left and right ventricular blood cavities and myocardium were manually segmented by an expert user (Analyze…

Colorization and automated segmentation of human T2 MR brain images for characterization of soft tissues

Attique M, Gilanie G, Hafeez U, Mehmood MS, Naweed MS, Ikram M, Kamran JA, Vitkin A. Colorization and automated segmentation of human T2 MR brain images for characterization of soft tissues. PLoS One. March 2012;7(3):e33616. Full Text – Open Access Publication Date March 2012 How Analyze was Used “The results from Gaussian clustering are obtained…

Automatic segmentation of brain white matter and white matter lesions in normal aging: comparison of five multispectral techniques

Valdés Hernández MC, Gallacher PJ, Bastin ME, Royle NA, Maniega SM, Deary IJ, Wardlaw JM. Automatic segmentation of brain white matter and white matter lesions in normal aging: comparison of five multispectral techniques. Magn Reson Imaging. February 2012;30(2):222-229. Publication Date February 2012 How Analyze was Used “We evaluated the four supervised multispectral classifiers available in…

In utero phenotyping of mouse embryonic vasculature with MRI

Berrios-Otero CA, Nieman BJ, Parasoglou P, Turnbull DH. In utero phenotyping of mouse embryonic vasculature with MRI. Magn Reson Med. January 2012;67(1):251-257. Full Text – Open Access Publication Date January 2012 How Analyze was Used “After processing individual embryos were manually segmented using a combination of Display … and Analyze (V7.0; AnalyzeDirect, Overland Park, KS).” Keywords…

Confounding neurodegenerative effects of manganese for in vivo MR imaging in rat models of brain insults

Bouilleret V, Cardamone L, Liu C, Koe AS, Fang K, Williams JP, Myers DE, O’Brien TJ, Jones NC. Confounding neurodegenerative effects of manganese for in vivo MR imaging in rat models of brain insults. J Magn Reson Imaging. October 2011;34(4):774-784. Publication Date October 2011 How Analyze was Used “All the image analyses were performed using…

The possible impact of noise-induced Ca2+-dependent activity in the central auditory pathway: a manganese-enhanced MRI study

Gröschel M, Möller S, Götze R, Ernst A, Basta D. The possible impact of noise-induced Ca2+-dependent activity in the central auditory pathway: a manganese-enhanced MRI study. Neuroimage. July 2011;57(1):190-197. Publication Date July 2011 How Analyze was Used “Signal intensity analysis was carried out with the software Analyze 5.0 (AnalyzeDirect, Inc.; Lenexa USA) in all optical…

Reliability of two techniques for assessing cerebral iron deposits with structural magnetic resonance imaging

Valdés Hernández MC, Jeong TH, Murray C, Bastin ME, Chappell FM, Deary IJ, Wardlaw JM. Reliability of two techniques for assessing cerebral iron deposits with structural magnetic resonance imaging. J Magn Reson Imaging. January 2011;33(1):54-61. Publication Date January 2011 How Analyze was Used “A brain mask was then obtained from the T2*W data using the…

Dynamic shape instantiation for intra-operative guidance

Lee SL, Chung A, Lerotic M, Hawkins MA, Tait D, Yang GZ. Dynamic shape instantiation for intra-operative guidance. Med Image Comput Comput Assist Interv. September 2010;13(Pt 1):69-76. Publication Date September 2010 How Analyze was Used “Segmentation and 3D model building were performed in Analyze (AnalyzeDirect, Inc, Overland Park, KS, USA).” Keywords Algorithms Computer Simulation Female…

Manganese-enhanced MRI of salivary glands and head and neck tumors in living subjects

Seshadri M, Hoy A. Manganese-enhanced MRI of salivary glands and head and neck tumors in living subjects. Magn Reson Med. September 2010;64(3):902-906. Publication Date September 2010 How Analyze was Used “Following image acquisition, raw image sets were transferred to a processing workstation and converted into Analyze™ format (AnalyzeDirect, version 8.0; Overland Park, KS). Regions of…

A fast and efficient method to compensate for brain shift for tumor resection therapies measured between preoperative and postoperative tomograms

Dumpuri P, Thompson RC, Cao A, Ding S, Garg I, Dawant BM, Miga MI. A fast and efficient method to compensate for brain shift for tumor resection therapies measured between preoperative and postoperative tomograms. IEEE Trans Biomed Eng. June 2010;57(6):1285-1296. Full Text – Open Access Publication Date June 2010 How Analyze was Used “Some segmentation…