Solveig Skovlund Groen et al. Fibrogenesis Biomarkers and Clinical Disease Progression in ADPKD Kidney International Reports. Publication Date September 22, 2026 How Analyze was Used “Magnetic resonance imaging (MRI) was performed to measure total kidney volume (TKV) using a standardized abdominal MRI protocol without contrast. TKV was measured on T2-weighted coronal images using Analyze 9.0…
Carlos Flechas Becerra et al. X-Ray Visible Protein Scaffolds by Bulk Iodination Advanced Science. Publication Date December 25, 2023 How Analyze was Used “3D ROI analysis was done using Analyze 14.0 software (AnalyzeDirect, Overland Park, KS) using manually-drawn volumes of interest on labeled and unlabeled meshes, and corresponding upper thigh muscles for each animal. Intensity-based…
Nithya Subrahmanyam et al. Targeting Intratibial Osteosarcoma Using Water-Soluble Copolymers Conjugated to Collagen Hybridizing Peptides Molecular Pharmaceutics. Publication Date February 1, 2023 How Analyze was Used “TEx vivo tibias of mice were scanned by μ-CT, and resulting 3D reconstructions were segmented and analyzed using the Bone Microarchitecture Analysis tool of AnalyzeDirect 14.0 software.” Keywords Collagen,…
Hiroyuki Yamaguchi et al. IFT20 is critical for collagen biosynthesis in craniofacial bone formation Biochemical and Biophysical Research Communications. Publication Date September 28, 2020 How Analyze was Used “One hundred slices of metaphyses under the growth plate, constituting 1.0 mm in length, were selected and reconstructed to produce 2D and 3D images (Analyze12.0: AnalyzeDirect Inc.,…
Arbabi V, Pouran B, Weinans H, Zadpoor AA. Transport of neutral solute across articular cartilage: the role of zonal diffusivities. J Biomech Eng. March 2015. Publication Date March 2015 How Analyze was Used “The 3D reconstructed images were converted to 2D slices (TIFF format) using in-built software of the micro-CT machine (Analyze 11.0). We used…
Gillies AR, Bushong EA, Deerinck TJ, Ellisman MH, Lieber RL. Three-dimensional reconstruction of skeletal muscle extracellular matrix ultrastructure. Microsc Microanal. December 2014;20(6):1835-1840. Publication Date December 2014 How Analyze was Used “Analyze 11.0 software (AnalyzeDirect Inc., Overland Park, KS, USA) was also used to segment the same data sets. Objects were defined by thresholding a seed…
Ebrahimi B, Macura SI, Knudsen BE, Grande JP, Lerman LO. Fibrosis detection in renal artery stenosis mouse model using magnetization transfer MRI. Paper presented at: SPIE Medical Imaging 2013: Biomedical Applications in Molecular, Structural, and Functional Imaging, February 2013; Lake Buena Vista, FL. Publication Date February 2013 How Analyze was Used “Kidney volumes were calculated…
Barck KH, Lee WP, Diehl LJ, Ross J, Gribling P, Zhang Y, Nguyen K, van Bruggen N, Hurst S, Carano RA. Quantification of cortical bone loss and repair for therapeutic evaluation in collagen-induced arthritis, by micro-computed tomography and automated image analysis. Arthritis Rheum. October 2004;50(10):3377-3386. Full Text – Open Access Publication Date October 2004 How…
Jester JV, Ho-Chang J. Modulation of cultured corneal keratocyte phenotype by growth factors/cytokines control in vitro contractility and extracellular matrix contraction. Exp Eye Res. November 2003;77(5):581-592. Publication Date November 2003 How Analyze was Used “Images were then digitized and the area of each gel quantified using ANALYZE software (version 7·0).” Keywords Animals Cell Division/drug effects…
Holmes III DR, Robb RA. Quantitative image analysis of histological sections of coronary arteries. Paper presented at: Medical Imaging 2000: Image Processing, February 2000; San Diego, CA, US. Publication Date February 2000 How Analyze was Used “The center panel shows the oblique tool in Analyze AVW used to relate the 3D visualization to the 2D…
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