Tag Archives: Brain/pathology

Lesion Explorer: a comprehensive segmentation and parcellation package to obtain regional volumetrics for subcortical hyperintensities and intracranial tissue

Ramirez J, Gibson E, Quddus A, Lobaugh NJ, Feinstein A, Levine B, Scott CJM, Levy-Cooperman N, Gao FQ, Black SE. Lesion Explorer: a comprehensive segmentation and parcellation package to obtain regional volumetrics for subcortical hyperintensities and intracranial tissue. Neuroimage. January 2011;54(2):963-973. Publication Date January 2011 How Analyze was Used “A set of easily identified landmarks…

Differential effects of age and history of hypertension on regional brain volumes and iron

Rodrigue KM, Haacke EM, Raz N. Differential effects of age and history of hypertension on regional brain volumes and iron. Neuroimage. January 2011;54(2):750-759. Full Text – Open Access Publication Date January 2011 How Analyze was Used “All ROI areas were measured with the ROI tool in the Analyze software, and volumes were computed by multiplying…

Diffusion tensor imaging abnormalities in cognitively impaired multiple sclerosis patients

Akbar N, Lobaugh NJ, O’Connor P, Moradzadeh L, Scott CJM, Feinstein A. Diffusion tensor imaging abnormalities in cognitively impaired multiple sclerosis patients. Can J Neurol Sci. September 2010;37(5):608-614. Full Text – Open Access Publication Date September 2010 How Analyze was Used “Lesion analysis Magnetic resonance images were processed on a Sun computer workstation … using…

New multispectral MRI data fusion technique for white matter lesion segmentation: method and comparison with thresholding in FLAIR images

Valdés Hernández MC, Ferguson KJ, Chappell FM, Wardlaw JM. New multispectral MRI data fusion technique for white matter lesion segmentation: method and comparison with thresholding in FLAIR images. Eur Radiol. July 2010;20(7):1684-1691. Full Text – Open Access Publication Date July 2010 How Analyze was Used “To determine the best and most subject-specific thresholds, we sampled…

Automatic segmentation of white matter hyperintensities in the elderly using FLAIR images at 3T

Gibson E, Gao F, Black SE, Lobaugh NJ. Automatic segmentation of white matter hyperintensities in the elderly using FLAIR images at 3T. J Magn Reson Imaging. June 2010;31(6):1311-1322. Full Text – Open Access Publication Date June 2010 How Analyze was Used “To determine whether limited manual editing could further improve the segmentation results, the automated…

Lack of hippocampal volume differences in primary insomnia and good sleeper controls: an MRI volumetric study at 3 Tesla

Winkelman JW, Benson KL, Buxton OM, Lyoo IK, Yoon S, O’Connor S, Renshaw PF. Lack of hippocampal volume differences in primary insomnia and good sleeper controls: an MRI volumetric study at 3 Tesla. Sleep Med. June 2010;11(6):576-582. Publication Date June 2010 How Analyze was Used “Image processing was performed with ANALYZE 5.0 software.” Keywords Adult…

Quantifying the effects of normal ageing on white matter structure using unsupervised tract shape modelling

Bastin ME, Muñoz Maniega S, Ferguson KJ, Brown LJ, Wardlaw JM, MacLullich AMJ, Clayden JD. Quantifying the effects of normal ageing on white matter structure using unsupervised tract shape modelling. Neuroimage. May 2010;51(1):1-10. Full Text – Open Access Publication Date May 2010 How Analyze was Used “Intracranial volume (ICV), namely all structures within the cranium…

Aetiological differences in neuroanatomy of the vegetative state: insights from diffusion tensor imaging and functional implications

Newcombe VFJ, Williams GB, Scoffings D, Cross J, Carpenter TA, Pickard JD, Menon DK. Aetiological differences in neuroanatomy of the vegetative state: insights from diffusion tensor imaging and functional implications. J Neurol Neurosurg Psychiatry. May 2010;81(5):552-561. Full Text – Open Access Publication Date May 2010 How Analyze was Used “Regions of interest (ROIs) were manually…

Diffuse damage in pediatric traumatic brain injury: a comparison of automated versus operator-controlled quantification methods

Bigler ED, Abildskov TJ, Wilde EA, McCauley SR, Li X, Merkley TL, Fearing MA, Newsome MR, Scheibel RS, Hunter JV, Chu Z, Levin HS. Diffuse damage in pediatric traumatic brain injury: a comparison of automated versus operator-controlled quantification methods. Neuroimage. April 2010;50(3):1017-1026. Publication Date April 2010 How Analyze was Used “Using operator-controlled ANALYZE® 7.0 …,…

Diffusion tensor imaging abnormalities in depressed multiple sclerosis patients

Feinstein A, O’Connor P, Akbar N, Moradzadeh L, Scott CJM, Lobaugh NJ. Diffusion tensor imaging abnormalities in depressed multiple sclerosis patients. Mult Scler. February 2010;16(2):189-196. Publication Date February 2010 How Analyze was Used “Lesion analysis MR images were processed on a Sun computer workstation … using the Analyze AVW 6.0 software package.” Keywords Adult Atrophy Brain/pathology…