Tag Archives: Brain

Longitudinal assessment of brain tumors using a repeatable prior-based segmentation

Weizman L, Joskowicz L, Ben-Sira L, Shofty B, Constantini S, Ben-Bashat D. Longitudinal assessment of brain tumors using a repeatable prior-based segmentation. Paper presented at: Biomedical Imaging: From Nano to Macro, 2011 IEEE International Symposium on; March 2011. Publication Date March 2011 How Analyze was Used “An expert radiologist manually produced ground-truth segmentations for each…

Atlas selection strategy for automatic segmentation of pediatric brain MRIs into 83 ROIs

Gousias I, Hammers A, Heckemann R, Counsell S, Dyet L, Boardman J, Edwards A, Rueckert D. Atlas selection strategy for automatic segmentation of pediatric brain MRIs into 83 ROIs. Paper presented at: 2010 IEEE International Conference on Imaging Systems and Techniques (IST); July 2010; Thessaloniki. Publication Date July 2010 How Analyze was Used “The 83…

Cortical thickness estimation using DIR imaging with GRAPPA factor 2

Choi N, Nam Y, Kim D-H. Cortical thickness estimation using DIR imaging with GRAPPA factor 2. J Korean Soc Magn Reson Med. June 2010;14(1):56-63. Publication Date June 2010 How Analyze was Used “To extract white matter information from the DIR image, Analyze 9.0 was used.” Keywords Artifacts Brain European Continental Ancestry Group Humans Male Author…

Contrasting roles for CD4 and CD8 T cells in a murine model of T1 black hole formation

Pirko I, McDole J, Chen Y, Dunn S, Lindquist D, Johnson A. Contrasting roles for CD4 and CD8 T cells in a murine model of T1 black hole formation. Paper presented at: Joint Annual Meeting International Society for Magnetic Resonance in Medicine-European Society for Magnetic Resonance in Medicine and Biology; May 2010; Stockholm. Full Text…

Relative recirculation (rR): a potential tool for monitoring blood-brain barrier disruption in secondary progressive multiple sclerosis

Kassner A, Sitartchouk I, Thornhill R, Carroll T, Mulay C, Aviv R. Relative recirculation (rR): a potential tool for monitoring blood-brain barrier disruption in secondary progressive multiple sclerosis. Paper presented at: Joint Annual Meeting International Society for Magnetic Resonance in Medicine-European Society for Magnetic Resonance in Medicine and Biology, May 2010; Stockholm. Full Text –…

Subregional parcellation and segmentation of the prefrontal cortex in children–protocol calibration

GarcíaBarrera M, Hatter J, TrujilloOrrego N, Gicas K, Wilson J, Hynd G. Subregional parcellation and segmentation of the prefrontal cortex in children–protocol calibration. Paper presented at: The 20th Annual Rotman Research Institute Conference: The frontal lobes, March 2010; Toronto, Canada. Full Text – Open Access Publication Date March 2010 How Analyze was Used “Our protocol…

MEMRI and single pellet reaching in rats

Cross A, Alaverdashvili M, Lapointe V, Whishaw I. MEMRI and single pellet reaching in rats. Paper presented at: ISMRM 17th Scientific Meeting and Exhibition; April 2009, Honolulu. Publication Date April 2009 How Analyze was Used “Signal intensity from ROIs were extracted from the T1 images with Analyze 8.1.” Keywords Brain Contrast Media Image Enhancement Magnetic…

MRI detectable spinal cord atrophy correlates with disability in a murine model of multiple sclerosis

Pirko I, Johnson A, Lohrey AK, Ying J, Lindquist D, Dunn R. MRI detectable spinal cord atrophy correlates with disability in a murine model of multiple sclerosis. Paper presented at: ISMRM 17th Scientific Meeting and Exhibition, April 2009; Honolulu, HI, US. Publication Date April 2009 How Analyze was Used “3D images were co-registered to a…

An image warping technique for rodent brain MRI-histology registration based on thin-plate splines with landmark optimization

Liu Y, Uberti M, Dou H, Mosley RL, Gendelman HE, Boska MD. An image warping technique for rodent brain MRI-histology registration based on thin-plate splines with landmark optimization. Paper presented at: SPIE Medical Imaging; March 2009; Lake Buena Vista, FL, US. Publication Date March 2009 How Analyze was Used “Before the nonlinear registration of MRI…

Registration of in vivo MR to histology of rodent brains using blockface imaging

Uberti M, Liu Y, Dou H, Mosley RL, Gendelman HE, Boska M. Registration of in vivo MR to histology of rodent brains using blockface imaging. Paper presented at: SPIE Medical Imaging 2009: Biomedical Applications in Molecular, Structural, and Functional Imaging; February 2009; Lake Buena Vista, FL. Publication Date February 2009 How Analyze was Used “The…