Tag Archives: Software

Patient specific physical anatomy models

Cameron BM, Holmes III DR, Rettmann ME, Robb RA. Patient specific physical anatomy models. In: Westwood JD, ed. Medicine meets virtual reality 16 : parallel, combinatorial, convergent : NextMed by design. Washington, DC: IOS Press; 2008:68-73. Full Text – Open Access Publication Date February 2008 How Analyze was Used “Segmentation is done semi-automatically using our…

Development of a mechanical testing assay for fibrotic murine liver

Barnes SL, Lyshchik A, Washington MK, Gore JC, Miga MI. Development of a mechanical testing assay for fibrotic murine liver. Med Phys. November 2007;34(11):4439-4450. Publication Date November 2007 How Analyze was Used “In all experiments, the control, normal, and fibrosis gel systems were imaged and the gel and tissue were segmented using AnalyzeAVW.” Keywords Acrylic…

Cicerone: stereotactic neurophysiological recording and deep brain stimulation electrode placement software system

Miocinovic S, Noecker AM, Maks CB, Butson CR, McIntyre CC. Cicerone: stereotactic neurophysiological recording and deep brain stimulation electrode placement software system. Acta Neurochir Suppl. August 2007;97(Pt 2):561-567. Publication Date August 2007 How Analyze was Used “The MRI and CT are co-registered in Analyze 6.0 (AnalyzeDirect, Lenexa, KS) and imported into Cicerone as VTK volume…

Correlation of quantitative MRI and neuropathology in epilepsy surgical resection specimens–T2 correlates with neuronal tissue in gray matter

Eriksson SH, Free SL, Thom M, Martinian L, Symms MR, Salmenpera TM, McEvoy AW, Harkness W, Duncan JS, Sisodiya SM. Correlation of quantitative MRI and neuropathology in epilepsy surgical resection specimens–T2 correlates with neuronal tissue in gray matter. Neuroimage. August 2007;37(1):48-55. Full Text – Open Access Publication Date August 2007 How Analyze was Used “The…

Stereotactic neurosurgical planning, recording, and visualization for deep brain stimulation in non-human primates

Miocinovic S, Zhang J, Xu W, Russo GS, Vitek JL, McIntyre CC. Stereotactic neurosurgical planning, recording, and visualization for deep brain stimulation in non-human primates. J Neurosci Methods. May 2007;162(1-2):32-41. Full Text – Open Access Publication Date May 2007 How Analyze was Used “The MRI and CT were co-registered in Analyze 6.0 (AnalyzeDirect, Lenexa, KS)…

Comparison of manual and semi-automated delineation of regions of interest for radioligand PET imaging analysis

Chow TW, Takeshita S, Honjo K, Pataky CE, St Jacques PL, Kusano ML, Caldwell CB, Ramirez J, Black S, Verhoeff NPLG. Comparison of manual and semi-automated delineation of regions of interest for radioligand PET imaging analysis. BMC Nucl Med. January 2007;7:2. Full Text – Open Access Publication Date January 2007 How Analyze was Used “Identification…

Accuracy of three-dimensional measurements using cone-beam CT

Pinsky HM, Dyda S, Pinsky RW, Misch KA, Sarment DP. Accuracy of three-dimensional measurements using cone-beam CT. Dentomaxillofac Radiol. November 2006;35(6):410-416. Full Text – Open Access Publication Date November 2006 How Analyze was Used “Automated volume calculation: CBCT data were imported into a separate software (Analyze; AnalyzeDirect Inc.).” Keywords Acrylic Resins Humans Image Processing, Computer-Assisted/methods…

Parcellating the temporal lobes from magnetic resonance images using generic software in subjects at high risk of developing schizophrenia

Yates SL, Barach A, Gingell S, Whalley HC, Job D, Johnstone EC, Best JJ, Lawrie SM. Parcellating the temporal lobes from magnetic resonance images using generic software in subjects at high risk of developing schizophrenia. Psychiatry Res. October 2006;147(2-3):197-212. Publication Date October 2006 How Analyze was Used “Parcellation was carried out using the software program…

The volar extension of the lunate facet of the distal radius: a quantitative anatomic study

Andermahr J, Lozano-Calderon S, Trafton T, Crisco JJ, Ring D. The volar extension of the lunate facet of the distal radius: a quantitative anatomic study. J Hand Surg Am. July 2006;31(6):892-895. Publication Date July 2006 How Analyze was Used “Segmentation was performed using image-processing software (ANALYZE).” Keywords Adult Aged Bone Plates Bone Screws Female Fracture…

Tumor volume measurement and volume measurement comparison plug-ins for VolView using ITK

Popa T, Ibanez L, Levy E, White A, Bruno J, Cleary K. Tumor volume measurement and volume measurement comparison plug-ins for VolView using ITK. Paper presented at: Medical Imaging 2006: Visualization, Image-Guided Procedures, and Display, March 2006; San Diego. Publication Date March 2006 How Analyze was Used “We validated the results from the volume measurement…