Tag Archives: Electron Microscopy

Evidence for ectopic neurotransmission at a neuronal synapse

Coggan JS, Bartol TM, Esquenazi E, Stiles JR, Lamont S, Martone ME, Berg DK, Ellisman MH, Sejnowski TJ. Evidence for ectopic neurotransmission at a neuronal synapse. Science. July 2005;309(5733):446-451. Full Text – Open Access Publication Date July 2005 How Analyze was Used “Cross-sectional view about halfway through the middle of an E15 chick CG [ciliary…

Acute rat lung injury: feasibility of assessment with micro-CT

Langheinrich AC, Leithauser B, Greschus S, Von Gerlach S, Breithecker A, Matthias FR, Rau WS, Bohle RM. Acute rat lung injury: feasibility of assessment with micro-CT. Radiology. October 2004;233(1):165-171. Full Text – Open Access Publication Date October 2004 How Analyze was Used “Image analysis was performed by using the Analyze software package version 4.0 ……

A functional aquaporin co-localizes with the vacuolar proton pyrophosphatase to acidocalcisomes and the contractile vacuole complex of Trypanosoma cruzi

Montalvetti A, Rohloff P, Docampo R. A functional aquaporin co-localizes with the vacuolar proton pyrophosphatase to acidocalcisomes and the contractile vacuole complex of Trypanosoma cruzi. J Biol Chem. September 2004;279(37):38673-38682. Full Text – Open Access Publication Date September 2004 How Analyze was Used “The surface area of the sequential images was calculated using AnalyzeAVW version…

Defects in cholangiocyte fibrocystin expression and ciliary structure in the PCK rat

Masyuk TV, Huang BQ, Ward CJ, Masyuk AI, Yuan D, Splinter PL, Punyashthiti R, Ritman EL, Torres VE, Harris PC, LaRusso NF. Defects in cholangiocyte fibrocystin expression and ciliary structure in the PCK rat. Gastroenterology. November 2003;125(5):1303-1310. Publication Date November 2003 How Analyze was Used “Quantitative analysis was performed using ANALYZE.” Keywords Animals Bile Ducts/metabolism/pathology…

Stanniocalcin 1 alters muscle and bone structure and function in transgenic mice

Filvaroff EH, Guillet S, Zlot C, Bao M, Ingle G, Steinmetz H, Hoeffel J, Bunting S, Ross J, Carano RA, Powell-Braxton L, Wagner GF, Eckert R, Gerritsen ME, French DM. Stanniocalcin 1 alters muscle and bone structure and function in transgenic mice. Endocrinology. September 2002;143(9):3681-3690. Full Text – Open Access Publication Date September 2002 How…

Ultrastructure of a somatic spine mat for nicotinic signaling in neurons

Shoop RD, Esquenazi E, Yamada N, Ellisman MH, Berg DK. Ultrastructure of a somatic spine mat for nicotinic signaling in neurons. J Neurosci. February 2002;22(3):748-756. Full Text – Open Access Publication Date February 2002 How Analyze was Used “Somatic spine length, volume, and surface area were measured from the segmented volumes with XDend software, and…

Protoplasmic astrocytes in CA1 stratum radiatum occupy separate anatomical domains

Bushong EA, Martone ME, Jones YZ, Ellisman MH. Protoplasmic astrocytes in CA1 stratum radiatum occupy separate anatomical domains. J Neurosci. January 2002;22(1):183-192. Full Text – Open Access Publication Date January 2002 How Analyze was Used “Tilt series through ±60° were acquired on film at 400 KeV using a JEOL … 4000EX electron microscope, and tomographic…

Selective localization of high concentrations of F-actin in subpopulations of dendritic spines in rat central nervous system: a three-dimensional electron microscopic study

Capani F, Martone ME, Deerinck TJ, Ellisman MH. Selective localization of high concentrations of F-actin in subpopulations of dendritic spines in rat central nervous system: a three-dimensional electron microscopic study. J Comp Neurol. June 2001;435(2):156-170. Publication Date June 2001 How Analyze was Used “The final volume was rendered and viewed by using ANALYZE AVW, a…

Intracellular distribution of gravin, a PKA and PKC binding protein, in vascular endothelial cells

Grove BD, Bruchey AK. Intracellular distribution of gravin, a PKA and PKC binding protein, in vascular endothelial cells. J Vasc Res. March 2001;38(2):163-175. Publication Date March 2001 How Analyze was Used “Stereo images were created using Confocal Assistant software while other image reconstructions from confocal data were performed using Analyze.” Keywords A Kinase Anchor Proteins…

Neuronal acetylcholine receptors with α7 subunits are concentrated on somatic spines for synaptic signaling in embryonic chick ciliary ganglia

Shoop RD, Martone ME, Yamada N, Ellisman MH, Berg DK. Neuronal acetylcholine receptors with α7 subunits are concentrated on somatic spines for synaptic signaling in embryonic chick ciliary ganglia. J Neurosci. January 1999;19(2):692-704. Full Text – Open Access Publication Date January 1999 How Analyze was Used “Membrane length was measured using Analyze software.” Keywords Animals…