Tag Archives: Cerebral Cortex/pathology

Global cerebral atrophy after subarachnoid hemorrhage: a possible marker of acute brain injury and assessment of its impact on outcome

Tam AKH, Ilodigwe D, Li Z, Schweizer TA, Macdonald RL. Global cerebral atrophy after subarachnoid hemorrhage: a possible marker of acute brain injury and assessment of its impact on outcome. Acta Neurochir Suppl. June 2012;115:17-21. Publication Date June 2012 How Analyze was Used “All CT images were set at a common brightness and contrast value,…

Small gray matter volume in orbitofrontal cortex in Prader-Willi syndrome: a voxel-based MRI study

Ogura K, Fujii T, Abe N, Hosokai Y, Shinohara M, Takahashi S, Mori E. Small gray matter volume in orbitofrontal cortex in Prader-Willi syndrome: a voxel-based MRI study. Hum Brain Mapp. July 2011;32(7):1059-1066. Publication Date July 2011 How Analyze was Used “Prior to VBM [voxel-based morphometry] preprocessing, nonbrain tissues surrounding the entire brain in each…

Enlargement of thalamic nuclei in Tourette syndrome

Miller AM, Bansal R, Hao X, Sanchez-Pena JP, Sobel LJ, Liu J, Xu D, Zhu H, Chakravarty MM, Durkin K, Ivanov I, Plessen KJ, Kellendonk CB, Peterson BS. Enlargement of thalamic nuclei in Tourette syndrome. Arch Gen Psychiatry. September 2010;67(9):955-964. Full Text – Open Access Publication Date September 2010 How Analyze was Used “Morphometric analyses…

Diagnostic utility of cerebral white matter integrity in early Alzheimer’s disease

Johnson DK, Barrow W, Anderson R, Harsha A, Honea R, Brooks WM, Burns JM. Diagnostic utility of cerebral white matter integrity in early Alzheimer’s disease. Int J Neurosci. August 2010;120(8):544-550. Full Text – Open Access Publication Date August 2010 How Analyze was Used “After preprocessing, the hippocampus was traced by two raters using Analyze software…

Posterior cingulate cortex atrophy and regional cingulum disruption in mild cognitive impairment and Alzheimer’s disease

Choo IH, Lee DY, Oh JS, Lee JS, Lee DS, Song IC, Youn JC, Kim SG, Kim KW, Jhoo JH, Woo JI. Posterior cingulate cortex atrophy and regional cingulum disruption in mild cognitive impairment and Alzheimer’s disease. Neurobiol Aging. May 2010;31(5):772-779. Publication Date May 2010 How Analyze was Used “The anatomical boundaries of ERC, hippocampus…

Relationships between essential cortical language sites and subcortical pathways

Ellmore TM, Beauchamp MS, O’Neill TJ, Dreyer S, Tandon N. Relationships between essential cortical language sites and subcortical pathways. J Neurosurg. October 2009;111(4):755-766. Publication Date October 2009 How Analyze was Used “A T1-weighted anatomical MR image with the AF fibers superimposed as white voxels was loaded as an Analyze format volume (AnalyzeDirect, Inc.) onto a…

Use of magnetic resonance imaging for anatomical phenotyping of the R6/2 mouse model of Huntington’s disease

Sawiak SJ, Wood NI, Williams GB, Morton AJ, Carpenter TA. Use of magnetic resonance imaging for anatomical phenotyping of the R6/2 mouse model of Huntington’s disease. Neurobiol Dis. January 2009;33(1):12-19. Publication Date January 2009 How Analyze was Used “Analyze 7.5 … was used to delineate each structure manually, defining for each a region of interest…

Gray matter atrophy in patients with ischemic stroke with cognitive impairment

Stebbins GT, Nyenhuis DL, Wang C, Cox JL, Freels S, Bangen K, deToledo-Morrell L, Sripathirathan K, Moseley M, Turner DA, Gabrieli JD, Gorelick PB. Gray matter atrophy in patients with ischemic stroke with cognitive impairment. Stroke. March 2008;39(3):785-793. Full Text – Open Access Publication Date March 2008 How Analyze was Used “The lesion volumes were…

Voxel-based morphometry in autopsy proven PSP and CBD

Josephs KA, Whitwell JL, Dickson DW, Boeve BF, Knopman DS, Petersen RC, Parisi JE, Jack CR, Jr. Voxel-based morphometry in autopsy proven PSP and CBD. Neurobiol Aging. February 2008;29(2):280-289. Full Text – Open Access Publication Date February 2008 How Analyze was Used “All renders were performed with the Analyze 7.0 software program. ” Keywords Aged…

Volumetric cortical loss in sporadic and familial amyotrophic lateral sclerosis

Turner MR, Hammers A, Allsop J, Al-Chalabi A, Shaw CE, Brooks DJ, Leigh PN, Andersen PM. Volumetric cortical loss in sporadic and familial amyotrophic lateral sclerosis. Amyotroph Lateral Scler. December 2007;8(6):343-347. Publication Date December 2007 How Analyze was Used “Whole brain MRI datasets were reoriented to anterior commissure‐posterior commissure orientation and resliced to obtain 1…