Tag Archives: Algorithms

Comprehensive brain MRI segmentation in high risk preterm newborns

Yu X, Zhang Y, Lasky RE, Datta S, Parikh NA, Narayana PA. Comprehensive brain MRI segmentation in high risk preterm newborns. PLoS One. November 2010;5(11):e13874. Full Text – Open Access Publication Date November 2010 How Analyze was Used “Axial PD/T2 images were transferred to a Windows workstation for post-processing and imported into Analyze 8.1 software……

Dynamic shape instantiation for intra-operative guidance

Lee SL, Chung A, Lerotic M, Hawkins MA, Tait D, Yang GZ. Dynamic shape instantiation for intra-operative guidance. Med Image Comput Comput Assist Interv. September 2010;13(Pt 1):69-76. Publication Date September 2010 How Analyze was Used “Segmentation and 3D model building were performed in Analyze (AnalyzeDirect, Inc, Overland Park, KS, USA).” Keywords Algorithms Computer Simulation Female…

Heat kernel smoothing using Laplace-Beltrami eigenfunctions

Seo S, Chung MK, Vorperian HK. Heat kernel smoothing using Laplace-Beltrami eigenfunctions. Med Image Comput Comput Assist Interv. September 2010;13(Pt 3):505-512. Full Text – Open Access Publication Date September 2010 How Analyze was Used “CT scans were converted to DICOM format and subsequently Analyze 8.1 software package (AnalyzeDirect, Inc., Overland Park, KS) was used in…

In-vivo kinematic analysis of forearm rotation using helical axis analysis

Tay SC, van Riet R, Kazunari T, Amrami KK, An KN, Berger RA. In-vivo kinematic analysis of forearm rotation using helical axis analysis. Clin Biomech (Bristol, Avon). August 2010;25(7):655-659. Publication Date August 2010 How Analyze was Used “The Digital Imaging and Communications in Medicine (DICOM) CT image data was imported into Analyze 7.0 (Robb et…

Automatic segmentation of white matter hyperintensities in the elderly using FLAIR images at 3T

Gibson E, Gao F, Black SE, Lobaugh NJ. Automatic segmentation of white matter hyperintensities in the elderly using FLAIR images at 3T. J Magn Reson Imaging. June 2010;31(6):1311-1322. Full Text – Open Access Publication Date June 2010 How Analyze was Used “To determine whether limited manual editing could further improve the segmentation results, the automated…

A fast and efficient method to compensate for brain shift for tumor resection therapies measured between preoperative and postoperative tomograms

Dumpuri P, Thompson RC, Cao A, Ding S, Garg I, Dawant BM, Miga MI. A fast and efficient method to compensate for brain shift for tumor resection therapies measured between preoperative and postoperative tomograms. IEEE Trans Biomed Eng. June 2010;57(6):1285-1296. Full Text – Open Access Publication Date June 2010 How Analyze was Used “Some segmentation…

Dynamic susceptibility contrast MRI with localized arterial input functions

Lee JJ, Bretthorst GL, Derdeyn CP, Powers WJ, Videen TO, Snyder AZ, Markham J, Shimony JS. Dynamic susceptibility contrast MRI with localized arterial input functions. Magn Reson Med. May 2010;63(5):1305-1314. Full Text – Open Access Publication Date May 2010 How Analyze was Used “All images were viewed and analyzed using Analyze AVW.” Keywords Algorithms Carotid…

A robust method to estimate the intracranial volume across MRI field strengths (1.5T and 3T)

Keihaninejad S, Heckemann RA, Fagiolo G, Symms MR, Hajnal JV, Hammers A. A robust method to estimate the intracranial volume across MRI field strengths (1.5T and 3T). Neuroimage. May 2010;50(4):1427-1437. Full Text – Open Access Publication Date May 2010 How Analyze was Used “Manual measurements as the gold standard were performed on T1-weighted images from…

A new gold-standard dataset for 2D/3D image registration evaluation

Pawiro S, Markelj P, Gendrin C, Figl M, Stock M, Bloch C, Weber C, Unger E, Nöbauer I, Kainberger F. A new gold-standard dataset for 2D/3D image registration evaluation. Paper presented at: SPIE Medical Imaging; February 2010. Publication Date February 2010 How Analyze was Used “The markers of three dimensional (3D) and two dimensional (2D)…

Kinetic filtering of [18F]Fluorothymidine in positron emission tomography studies

Gray KR, Contractor KB, Kenny LM, Al-Nahhas A, Shousha S, Stebbing J, Wasan HS, Coombes RC, Aboagye EO, Turkheimer FE, Rosso L. Kinetic filtering of [18F]Fluorothymidine in positron emission tomography studies. Phys Med Biol. February 2010;55(3):695-709. Publication Date February 2010 How Analyze was Used “From the summed image data, regions of interest (ROI) were defined…